If I looked correctly, the fuse #20 in PDC that blows feeds two things: powertrain control module B+ (12V feed) and ASD relay. ASD relay feeds the O2 sensor heater circuit, ignition coil and fuel injectors. ASD relay feed is hot, it's output is hot ONLY after PCM is powered up. So as RDC_ZJ mentioned, pull the ASD and see if the fuse blows. If it does, short is in the wire harness B+ feed to PCM/ ASD or bad PCM. If it does not, it's somewhere in the ASD system.
You may have a short in any of the circuits fed by ASD, and ALL of those are hot wires when you turn the ignition to run or starting positions. Coil and fuel injectors are ground controlled so a short to ground in the 12V feeds will blow a fuse.
Check if you have pinched or damaged a +12V feed wire on any of those, most likely focus on coil and injector wires because that's where you work with the intake swap.
Just to be sure - especially if you unplugged it during intake swap - check the connector next to/ behind passenger side valve cover at the firewall (two black connectors on the bracket), that's C131 (and C132) which has the RD/YL wire.
There is also the S100 splice which splits the feed from the #20 PDC fuse in the injector wire harness - name is a bit weird - splice is at the passenger side inner fender. That harness doesn't need to be touched so I doubt your problem is there.