Ok I have half doors so after a morning of carefully fitting the door skins onto the frames and putting the new roof on and zipping in the new windows, I was finally done and it looks great - black sailcloth with tinted windows. I go to slide the upper doors into the 3 peg holes and close the door. They don't shut all the way and stick out about an inch. It appears that the weatherstrip is catching and getting in the way and causing the door not to close all the way.

I messed around with it forever trying to re-adjust everything - the door skins, the side windows, the roof. I just can't figure out what is wrong. Its almost like the upper skins are too big or something. ???? Any tips?