Let's ask a couple of pretty straightforward questions:
1) what caused you to remove the old harness?
2) From what source - donor vehicle or Painless Products - did you obtain your wiring harness?
2.5) If From a Donor Vehicle - what year, make, model, engine and transmission type?
Thanks Asia - if you fill out your profile that will help us a great deal - here are some things that may be different from one Jeep to another and therefore may effect or impact your harness. i.e. do YOU have a 4.2 in yours as well?
Automatic or Manual Transmission
Not huge items - but I'm asking these questions because without knowing - it's hard to know specifically what the connections may be for exactly.
I am in the middle of a move so it's impossible for me to look it up. The wire codes should help figure it out. I am try to think what it could be like the chime module, mainenance module, fogs, rear wipe(hard top) and door switches. Look at the schematics I posted. They should help.
I can identify several of your connectors. However if you could post your pictures on JF and number each pic we'll be glad to help. The wiring diagram is also a good place to work from. Post those pics.
3rd pic looks like the connector the the AC/heater blower fan switch on the left of the heater control panel. Bottom pic is the light sockets for the heater control panel and something else - probably an ashtray light?