I had to notch my CJ top as well. Sorry, I don't have any pics as the top is in the basement for the summer. However, it should be fairly obvious. I set the top on and marked where I needed to cut. If I remember correctly it was not much maybe 3/8" or less just in the corners to clear the sport bars. I just made my marks, took the top off and laid it upside down in the yard and took a cut off wheel to it. It should only take a few minutes and if you marked correctly and smoothed the cut it will look factory.
1990 Jeep YJ 4.2
Howell EFI, BDS 3.5" lift, M.O.R.E 5/8" Boomerang shackles, 1" Daystar BL, 1" JKS MML, TFI, Crager soft 8s w 35" Dunlop Mud Rovers, Ford 8.8, 4.88s, Dana 30 E-Locker, Terra Flex SYE, Tom Woods CV shaft, Warn M8000.